====== Community Standards ======


===== Reference Proteomes =====
  * [[http://www.ebi.ac.uk/reference_proteomes/|Reference Proteome Homepage]]

===== Standard File Formats =====
  * [[http://orthoxml.org|SeqXML & OrthoXML]]
  * [[http://dx.doi.org/10.1093/bib/bbr025|Schmitt et al., Brief Bioinform 2011]]
  * [[https://github.com/jhcepas/ete/blob/2.2/scripts/etree2orthoxml| Newick to OrthoXML converter, based on ETE]]
  * Orthology (ORTH) Ontology
    * [[https://qfo.github.io/OrthologyOntology/|Documentation]]
    * [[https://purl.org/net/orth|RDF/Turtle file]]


===== Benchmarking Service =====
  * [[http://orthology.benchmark-service.org/|Orthology Benchmarking]]