Quest For Orthologs

Meetings
Community Standards
Orthology databases
Documents (Intranet)
Mailing-list & Contact

Table of Contents

  • Community Standards
    • Reference Proteomes
    • Standard File Formats
    • Benchmarking Service

Community Standards

Reference Proteomes

  • Reference Proteome Homepage

Standard File Formats

  • SeqXML & OrthoXML
  • Schmitt et al., Brief Bioinform 2011
  • Newick to OrthoXML converter, based on ETE
  • Orthology (ORTH) Ontology
    • Documentation
    • RDF/Turtle file

Benchmarking Service

  • Orthology Benchmarking
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prsnl10 on DW under the hood