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program [2017/02/15 23:51] – created Cécile Pereiraprogram [2017/02/15 23:53] (current) – [Session Orthology methods and resource advances I] Cécile Pereira
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 “Improving Hieranoid: hierarchical orthology inference”  “Improving Hieranoid: hierarchical orthology inference” 
  
 +=====Session "Shared resources in the orthology community"=====
  
 +Boeckmann Brigitte (Swiss-Prot group, SIB, Switzerland) 
 +“Quest for Orthologs (QfO) entails Quest for Tree of Life (QfToL): in Search of the Gene Stream”
  
 +Alan Sousa da Silva (EMBL-EBI, United Kingdom)
 +“The new extended UniProt Reference Proteomes and its implications for the QfO”
 +
 +Jesualdo Tomás Fernández-Breis (Universidad de Murcia, Spain) 
 +“Efforts in the semantic standardization of orthology content”
 +
 +=====Session "Orthology methods and resource advances II"=====
 +
 +Sergei Mekhedov (ATTAIN, USA) 
 +“Orthology redefined: Clusters of orthologous domains in Eukaryotes”
 +
 +Ikuo Uchiyama (National Institute for Basic Biology, Japan) 
 +“New developments in MBGD: incorporation of draft genome data and refinement of domain-level ortholog identification ”
 +
 +Adrian Altenhoff (SIB, Switzerland) 
 +“SIBLINGs: sharing all-against-all comparison across orthology projects”
 +
 +Odile Lecompte (iCUBE, Université de Strasbourg, France) 
 +“MyGeneFriends: a social network linking genes, diseases and researchers”
 +
 +Cedric Notredame (CRG, Spain) 
 +“Growing taller phylogenetic trees on structural compost”
 +
 +
 +=====Discussion Session=====
 +moderators Erik Sonnhammer, Christophe Dessimoz
 +
 +=====Session “From evolution to function”=====
 +
 +Bethan Yates (HUGO Gene Nomenclature Committee, EMBL-EBI, United Kingdom) 
 +“HGNC Efforts To Standardise Gene Nomenclature Across Vertebrate Genomes.”
 +
 +Cécile Pereira (Université Pairs-Sud, France) 
 +“A meta-approach for improving the prediction and the functional annotation of ortholog groups”
 +
 +Benjamin Liebeskind (University of Texas at Austin, USA) 
 +“Orthologous systems and human disease.”
 +
 +Suzanna Lewis (Lawrence Berkeley National Laboratory, USA) 
 +"Phylogeny-driven approaches to protein function determination."
 +
 +Shigehiro Kuraku (RIKEN Center for Life Science Technologies, Japan)
 +“Assessing vertebrate homolog space - from EvoDevo viewpoint”
 +
 +Klaas Vandepoele (Department of Plant Biotechnology and Bioinformatics (WE09), Ghent University, Belgium) 
 +“Hunting the unknown: gene function prediction in plants using comparative genomics and next-generation sequencing data analysis”
 +
 +
 +=====Discussion Session=====
 +Moderators Toni Gabaldon, Paul Thomas